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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "craftgrn" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'craftgrn: Integrative Chromatin Accessibility and RNA Framework for Gene Regulatory
  Networks'
version: 0.1.4
doi: 10.32614/CRAN.package.craftgrn
abstract: Provides a reproducible framework for constructing and comparing gene regulatory
  networks by integrating chromatin accessibility footprint scores with matched RNA
  expression data. It implements context-specific enhancer-gene linking, transcription
  factor focused network analysis, differential network analysis, and regulatory topic
  modeling workflows for systematic exploration of gene regulation across conditions.
authors:
- family-names: Li
  given-names: Yaoxiang
  email: liyaoxiang@outlook.com
- family-names: Yi
  given-names: Chunling
repository: https://oncologylab.r-universe.dev
repository-code: https://github.com/oncologylab/craftgrn
commit: 881ddec9ac09276bc801ec86b331fea4e23508c5
url: https://oncologylab.github.io/craftgrn/
date-released: '2026-06-10'
contact:
- family-names: Li
  given-names: Yaoxiang
  email: liyaoxiang@outlook.com